STRINGSTRING
Solyc03g111590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g111590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g111590.2.1Uncharacterized protein (1252 aa)    
Predicted Functional Partners:
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.980
Solyc11g067020.1.1
Histone deacetylase (430 aa)
       
  0.964
Solyc09g091440.2.1
Histone deacetylase (498 aa)
       
  0.964
Solyc06g071680.2.1
Histone deacetylase (471 aa)
       
  0.964
Solyc03g112410.1.1
Histone deacetylase (449 aa)
       
  0.964
Solyc09g061290.2.1
Uncharacterized protein (762 aa)
     
  0.963
Solyc06g083460.2.1
Uncharacterized protein (776 aa)
     
  0.963
Solyc01g100050.2.1
Uncharacterized protein (1132 aa)
     
  0.963
Solyc12g013940.1.1
Uncharacterized protein (407 aa)
     
  0.962
Solyc08g076030.2.1
Uncharacterized protein (1135 aa)
     
  0.962
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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