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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g111760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g111760.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g111760.2.1annotation not available (916 aa)    
Predicted Functional Partners:
RPE1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
     
      0.687
Solyc07g007210.2.1
annotation not available (925 aa)
       
      0.639
Solyc11g067010.1.1
G10 family protein (117 aa)
       
 
  0.567
Solyc09g009300.2.1
annotation not available (197 aa)
       
 
  0.567
101265113
annotation not available (1180 aa)
       
 
  0.548
Solyc03g118020.2.1
annotation not available (956 aa)
     
 
  0.437
Solyc03g118010.2.1
annotation not available (956 aa)
     
 
  0.437
101264590
annotation not available (936 aa)
           
  0.437
101244134
UDP-Glycosyltransferase superfamily protein (482 aa)
           
  0.435
101251630
annotation not available (491 aa)
     
 
  0.423
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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