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STRINGSTRING
101246616 protein (Solanum lycopersicum) - STRING interaction network
"101246616" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246616annotation not available (600 aa)    
Predicted Functional Partners:
101254553
annotation not available (432 aa)
   
  0.995
Solyc04g050420.1.1
annotation not available (128 aa)
   
 
  0.954
Solyc04g072800.2.1
annotation not available (239 aa)
       
  0.947
101265817
annotation not available (343 aa)
       
  0.938
101265096
Phosphoglycerate mutase family protein (303 aa)
       
  0.938
101248497
annotation not available (559 aa)
   
 
  0.927
101244755
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (452 aa)
         
  0.927
cdc5
CDC5-like protein (987 aa)
       
      0.857
101266918
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family (627 aa)
   
   
 
0.801
101254848
annotation not available (595 aa)
   
   
 
0.801
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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