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STRINGSTRING
Solyc03g112140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112140.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112140.2.1annotation not available (664 aa)    
Predicted Functional Partners:
Solyc05g014160.2.1
G-protein coupled receptors;GTPase activators (477 aa)
           
  0.560
Solyc10g006600.2.1
Gluconokinase; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the gluconokinase GntK/GntV family (149 aa)
           
  0.550
CPT3
annotation not available (165 aa)
           
  0.549
101251793
Uncharacterized protein; DGCR14-related (510 aa)
           
  0.459
Solyc02g081840.2.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mitochondrial matrix Mmp37 (InterP /.../015222); Has 325 Blast hits to 325 proteins in 172 species- Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source- NCBI BLink) (350 aa)
           
  0.454
101256530
annotation not available (413 aa)
       
 
  0.409
Solyc10g017710.1.1
annotation not available (495 aa)
       
 
  0.409
Solyc10g017700.1.1
annotation not available (423 aa)
       
 
  0.409
101258902
annotation not available (366 aa)
       
 
  0.409
104647683
annotation not available (395 aa)
       
 
  0.409
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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