STRINGSTRING
Solyc03g112150.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112150.1.1" - Elongation factor Tu in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112150.1.1Elongation factor Tu ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (477 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.998
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.996
Solyc07g018360.2.1
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1048 aa)
   
  0.972
ER49
Elongation factor Ts, mitochondrial ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (391 aa)
   
  0.971
Solyc10g006030.2.1
Uncharacterized protein (188 aa)
   
  0.968
Solyc01g096590.2.1
Uncharacterized protein (117 aa)
   
  0.968
Solyc01g096580.2.1
Uncharacterized protein (117 aa)
   
  0.968
Solyc11g008710.1.1
Uncharacterized protein (502 aa)
   
  0.968
Solyc04g074300.2.1
Uncharacterized protein (280 aa)
   
  0.961
Solyc04g063290.2.1
Uncharacterized protein (280 aa)
   
  0.961
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]