STRINGSTRING
Solyc03g112550.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112550.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112550.2.1Uncharacterized protein (316 aa)    
Predicted Functional Partners:
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
  0.980
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
  0.980
Solyc10g019040.1.1
Uncharacterized protein (453 aa)
     
  0.978
Solyc04g026270.2.1
Uncharacterized protein (271 aa)
     
  0.978
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
    0.842
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
    0.842
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
        0.830
Solyc03g025470.2.1
Kinesin-like protein (668 aa)
     
 
  0.675
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
 
  0.662
Solyc04g082900.2.1
Uncharacterized protein (389 aa)
     
 
    0.626
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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