STRINGSTRING
Solyc03g112650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112650.2.1Uncharacterized protein (222 aa)    
Predicted Functional Partners:
Solyc10g083350.1.1
Uncharacterized protein (294 aa)
   
     
  0.516
Solyc12g006810.1.1
Uncharacterized protein (317 aa)
   
     
  0.490
Solyc11g068460.1.1
Uncharacterized protein (249 aa)
       
      0.451
Solyc10g079890.1.1
Uncharacterized protein (340 aa)
       
      0.451
Solyc04g016400.2.1
Uncharacterized protein (242 aa)
       
      0.451
Solyc01g112170.2.1
Uncharacterized protein (169 aa)
       
      0.451
Solyc05g047480.1.1
Uncharacterized protein (87 aa)
   
          0.423
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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