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STRINGSTRING
101255285 protein (Solanum lycopersicum) - STRING interaction network
"101255285" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101255285Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; Has 210 Blast hits to 148 proteins in 42 spec /.../rchae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source- NCBI BLink) (1080 aa)    
Predicted Functional Partners:
101247416
Uncharacterized protein; NDH-dependent cyclic electron flow 1 (463 aa)
     
        0.821
101265478
Uncharacterized protein; Oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor (253 aa)
     
        0.633
101254504
Uncharacterized protein; Translation initiation factor 2, small GTP-binding protein (1010 aa)
     
        0.627
101252151
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (260 aa)
     
        0.625
atg6
Hop-interacting protein THI040 (523 aa)
     
 
  0.616
101266762
Unknown protein; Has 229 Blast hits to 229 proteins in 104 species- Archae - 0; Bacteria - 2; Metazoa - 79; Fungi - 90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source- NCBI BLink) (354 aa)
       
 
  0.616
101256723
PsbP-like protein 2 (227 aa)
     
        0.605
101250591
Vacuolar protein sorting 34; Belongs to the PI3/PI4-kinase family (815 aa)
       
 
  0.549
Solyc06g005080.2.1
Uncharacterized protein; Zinc ion binding (1067 aa)
     
   
  0.545
Solyc08g045850.2.1
Uncharacterized protein; Pentatricopeptide repeat (PPR-like) superfamily protein (699 aa)
     
        0.515
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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