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Solyc03g112830.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112830.2.1" - Phox in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112830.2.1Phox (PX) domain-containing protein (948 aa)    
Predicted Functional Partners:
atg6
Hop-interacting protein THI040 (523 aa)
     
 
  0.616
101266762
Unknown protein; Has 229 Blast hits to 229 proteins in 104 species- Archae - 0; Bacteria - 2; Metazoa - 79; Fungi - 90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source- NCBI BLink) (354 aa)
       
 
  0.616
101250591
Vacuolar protein sorting 34; Belongs to the PI3/PI4-kinase family (815 aa)
       
 
  0.549
Solyc06g005080.2.1
Uncharacterized protein; Zinc ion binding (1067 aa)
     
   
  0.545
101250423
Uncharacterized protein; Vacuoleless1 (VCL1) (843 aa)
           
  0.515
101260321
annotation not available (238 aa)
           
  0.513
101255025
ARM repeat superfamily protein (1731 aa)
           
  0.480
101267054
annotation not available (3587 aa)
     
 
  0.455
101244783
Uncharacterized protein; Zinc finger (ubiquitin-hydrolase) domain-containing protein (511 aa)
           
  0.455
101253672
Uncharacterized protein; Zinc finger (C3HC4-type RING finger) family protein (425 aa)
           
  0.455
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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