STRINGSTRING
Solyc03g112850.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g112850.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g112850.2.1Uncharacterized protein (105 aa)    
Predicted Functional Partners:
Solyc10g080590.1.1
Uncharacterized protein (164 aa)
   
  0.998
Solyc10g078960.1.1
Uncharacterized protein (164 aa)
   
  0.998
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.998
Solyc08g006900.2.1
Uncharacterized protein (133 aa)
     
  0.998
Solyc02g070310.2.1
Uncharacterized protein (133 aa)
     
  0.998
Solyc09g075290.2.1
Uncharacterized protein (187 aa)
     
  0.997
Solyc01g099900.2.1
Uncharacterized protein (187 aa)
     
  0.997
Solyc12g038950.1.1
Uncharacterized protein (130 aa)
     
  0.997
Solyc12g008720.1.1
Uncharacterized protein (120 aa)
     
  0.997
Solyc11g068420.1.1
Ribosomal protein (216 aa)
     
  0.997
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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