STRINGSTRING
Solyc03g113140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g113140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g113140.2.1Uncharacterized protein (301 aa)    
Predicted Functional Partners:
Solyc03g120470.2.1
MIP (1264 aa)
         
  0.890
Solyc12g044370.1.1
Uncharacterized protein (830 aa)
         
  0.871
Solyc10g079670.1.1
Uncharacterized protein (754 aa)
         
  0.871
Solyc05g055350.2.1
Uncharacterized protein (361 aa)
   
   
0.806
Solyc04g010080.2.1
Uncharacterized protein (729 aa)
           
  0.528
Solyc11g072430.1.1
Uncharacterized protein (247 aa)
           
  0.483
Solyc11g072420.1.1
Uncharacterized protein (914 aa)
           
  0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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