STRINGSTRING
Solyc03g113610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g113610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g113610.2.1Uncharacterized protein (374 aa)    
Predicted Functional Partners:
Solyc07g045370.2.1
Uncharacterized protein (628 aa)
     
  0.988
Solyc01g007140.2.1
Uncharacterized protein (880 aa)
     
  0.940
Solyc04g078780.2.1
Uncharacterized protein (448 aa)
     
  0.763
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
  0.685
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
  0.685
Solyc05g047420.2.1
Uncharacterized protein (443 aa)
     
 
  0.659
Solyc07g052340.2.1
Uncharacterized protein (884 aa)
     
 
  0.579
Solyc01g103740.2.1
Uncharacterized protein (504 aa)
     
 
  0.571
Solyc01g103720.2.1
Uncharacterized protein (99 aa)
     
 
  0.571
Solyc10g018520.1.1
Uncharacterized protein (861 aa)
     
 
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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