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101262800 protein (Solanum lycopersicum) - STRING interaction network
"101262800" - Pre-mRNA cleavage complex II protein family in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101262800Pre-mRNA cleavage complex II protein family (374 aa)    
Predicted Functional Partners:
Solyc07g045370.2.1
Las1-like family protein (628 aa)
     
 
  0.992
101251281
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (448 aa)
     
 
  0.983
101261149
annotation not available (880 aa)
     
 
  0.971
101266453
Uncharacterized protein; transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases (484 aa)
     
   
  0.951
Solyc03g120080.2.1
Periodic tryptophan protein 2 (666 aa)
     
   
  0.875
101250912
Glycine-rich protein (554 aa)
       
 
  0.858
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1096 aa)
     
        0.830
101264384
Cam interacting protein 111 (987 aa)
     
   
  0.823
101245092
Uncharacterized protein; Cell division cycle 48C (821 aa)
     
   
  0.823
101255904
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (415 aa)
     
   
  0.765
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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