STRINGSTRING
Solyc03g113760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g113760.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g113760.2.1Uncharacterized protein (385 aa)    
Predicted Functional Partners:
Solyc04g081580.2.1
Uncharacterized protein (744 aa)
       
      0.900
MA-1
26S protease regulatory subunit 6A homolog ; The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity) (423 aa)
       
      0.602
Solyc06g076860.2.1
Uncharacterized protein (532 aa)
     
 
  0.542
cdkB1
B1-type cyclin dependent kinase (303 aa)
     
 
  0.497
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
     
 
  0.462
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
     
 
  0.460
Solyc02g070780.2.1
DNA helicase (787 aa)
     
   
  0.446
RBR1
Retinoblastoma-related protein 1 (1018 aa)
           
  0.440
Solyc09g010670.2.1
Uncharacterized protein (195 aa)
           
  0.434
cdkB2
B2-type cyclin dependent kinase (315 aa)
     
 
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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