STRINGSTRING
Solyc03g113840.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g113840.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g113840.1.1Uncharacterized protein (462 aa)    
Predicted Functional Partners:
Solyc11g040150.1.1
Uncharacterized protein (479 aa)
   
 
  0.955
Solyc10g055620.1.1
Uncharacterized protein (256 aa)
   
 
  0.955
Solyc09g008360.2.1
Uncharacterized protein (496 aa)
   
 
  0.955
Solyc06g084590.2.1
Uncharacterized protein (492 aa)
   
 
  0.955
Solyc01g099750.2.1
Uncharacterized protein (453 aa)
   
 
  0.955
Solyc01g104040.2.1
Uncharacterized protein (1642 aa)
       
 
  0.606
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
       
      0.487
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
       
      0.487
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
       
      0.487
Solyc07g043560.2.1
Uncharacterized protein (890 aa)
       
      0.440
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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