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Solyc03g113900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g113900.2.1" - alpha-1,2-Mannosidase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g113900.2.1alpha-1,2-Mannosidase (578 aa)    
Predicted Functional Partners:
Solyc06g053860.2.1
alpha-1,2-Mannosidase (618 aa)
         
0.809
Solyc11g069400.1.1
Protein disulfide-isomerase (580 aa)
     
 
  0.747
Solyc11g019920.1.1
Uncharacterized protein (435 aa)
     
 
  0.747
Solyc07g021490.1.1
Uncharacterized protein (182 aa)
     
 
  0.747
Solyc06g075210.2.1
Uncharacterized protein (549 aa)
     
 
  0.747
Solyc06g065320.2.1
Uncharacterized protein (442 aa)
     
 
  0.747
Solyc06g060290.2.1
Protein disulfide-isomerase (438 aa)
     
 
  0.747
Solyc06g005940.2.1
Protein disulfide-isomerase (499 aa)
     
 
  0.747
Solyc05g056400.2.1
Protein disulfide-isomerase (529 aa)
     
 
  0.747
Solyc05g018700.2.1
Uncharacterized protein (496 aa)
     
 
  0.747
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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