STRINGSTRING
101248863 protein (Solanum lycopersicum) - STRING interaction network
"101248863" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248863annotation not available (458 aa)    
Predicted Functional Partners:
Solyc03g046450.2.1
annotation not available (2103 aa)
           
  0.564
Solyc02g089390.1.1
annotation not available (150 aa)
           
  0.564
Solyc02g089370.2.1
annotation not available (1670 aa)
           
  0.564
101244340
annotation not available (224 aa)
           
  0.560
101268642
annotation not available (217 aa)
           
  0.560
101262018
Uncharacterized protein; Ubiquitin-specific protease 8; Belongs to the peptidase C19 family (875 aa)
           
  0.521
PDF1B
Peptide deformylase 1B, chloroplastic; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family (279 aa)
           
  0.521
Solyc06g061270.1.1
annotation not available (210 aa)
           
  0.505
Solyc06g061260.1.1
annotation not available (193 aa)
           
  0.505
Solyc05g053970.2.1
annotation not available (352 aa)
           
  0.505
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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