STRINGSTRING
Solyc03g114370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g114370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g114370.2.1Uncharacterized protein (566 aa)    
Predicted Functional Partners:
Solyc09g083080.2.1
Uncharacterized protein (552 aa)
     
  0.987
Solyc05g055880.2.1
Uncharacterized protein (513 aa)
     
  0.987
Solyc09g061430.2.1
Putative nuclear GTPase (609 aa)
   
 
  0.986
Solyc06g084270.2.1
Uncharacterized protein (370 aa)
   
 
  0.986
Solyc06g083520.2.1
Uncharacterized protein (605 aa)
   
 
  0.986
Solyc04g081580.2.1
Uncharacterized protein (744 aa)
   
 
0.984
Solyc04g051670.2.1
Uncharacterized protein (1030 aa)
     
 
  0.983
Solyc11g020820.1.1
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (817 aa)
     
 
  0.983
Solyc11g020810.1.1
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (829 aa)
     
 
  0.983
Solyc10g046930.1.1
Uncharacterized protein (766 aa)
     
 
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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