STRINGSTRING
Solyc03g114400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g114400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g114400.2.1Uncharacterized protein (132 aa)    
Predicted Functional Partners:
Solyc11g072150.1.1
Uncharacterized protein (305 aa)
       
 
  0.949
Solyc01g096710.2.1
Uncharacterized protein (276 aa)
       
 
  0.949
Solyc11g068480.1.1
Uncharacterized protein (175 aa)
     
 
  0.945
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
     
 
  0.930
Solyc09g066480.2.1
Uncharacterized protein (1213 aa)
       
 
  0.926
Solyc07g053870.2.1
Uncharacterized protein (887 aa)
       
 
  0.926
Solyc01g068280.2.1
Uncharacterized protein (1215 aa)
       
 
  0.926
Solyc07g047610.2.1
Uncharacterized protein (560 aa)
       
  0.916
Solyc05g054200.2.1
Uncharacterized protein (543 aa)
       
  0.916
Solyc10g045400.1.1
Uncharacterized protein (404 aa)
       
  0.822
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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