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STRINGSTRING
101267977 protein (Solanum lycopersicum) - STRING interaction network
"101267977" - Protein of unknown function in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267977Protein of unknown function (DUF3353) (251 aa)    
Predicted Functional Partners:
101252967
Uncharacterized protein; Chromatin remodeling 5 (1707 aa)
           
  0.798
HO2
Heme oxygenase 2 (368 aa)
     
        0.772
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family (140 aa)
     
        0.711
101266682
RHOMBOID-like protein 15 (408 aa)
     
   
  0.618
101251354
annotation not available (318 aa)
           
  0.609
101256318
annotation not available (322 aa)
           
  0.609
101248009
annotation not available (441 aa)
           
  0.605
101252608
annotation not available (333 aa)
           
  0.582
Solyc08g008000.1.1
annotation not available (600 aa)
           
  0.582
Solyc11g020950.1.1
Uncharacterized protein; bZIP family transcription factor (326 aa)
           
  0.575
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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