STRINGSTRING
Solyc03g114470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g114470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g114470.2.1Uncharacterized protein (251 aa)    
Predicted Functional Partners:
Solyc03g007540.2.1
Uncharacterized protein (163 aa)
   
          0.523
Solyc12g049280.1.1
Uncharacterized protein (296 aa)
   
          0.520
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
   
          0.514
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
        0.513
Solyc01g104320.2.1
Uncharacterized protein (284 aa)
   
        0.507
Solyc00g127670.1.1
Annotation not available (158 aa)
   
        0.500
Solyc11g044530.1.1
Uncharacterized protein (234 aa)
   
        0.498
Solyc03g007830.2.1
Uncharacterized protein (177 aa)
   
          0.497
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
          0.496
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
          0.494
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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