STRINGSTRING
Solyc03g114690.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g114690.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g114690.2.1Uncharacterized protein (989 aa)    
Predicted Functional Partners:
Solyc02g093300.2.1
DNA polymerase alpha catalytic subunit (1561 aa)
     
 
  0.984
Solyc11g065900.1.1
DNA replication complex GINS protein SLD5 ; The GINS complex plays an essential role in the initiation of DNA replication (223 aa)
     
 
  0.981
Solyc01g088380.1.1
Uncharacterized protein (1428 aa)
     
 
  0.966
Solyc00g029080.1.1
Annotation not available (956 aa)
     
 
  0.966
Solyc09g059440.1.1
Uncharacterized protein (595 aa)
     
 
  0.965
Solyc05g008620.2.1
Uncharacterized protein (260 aa)
     
 
  0.956
Solyc01g110130.2.1
DNA helicase (831 aa)
     
 
  0.862
Solyc07g005020.2.1
DNA helicase (737 aa)
     
 
  0.857
Solyc11g040120.1.1
DNA helicase (860 aa)
     
 
  0.845
Solyc01g105530.2.1
Uncharacterized protein (75 aa)
     
 
  0.845
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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