STRINGSTRING
Solyc03g114780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g114780.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g114780.2.1Uncharacterized protein (1222 aa)    
Predicted Functional Partners:
Solyc01g107510.2.1
DNA repair protein REV1 ; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
     
      0.905
Solyc01g099220.2.1
DNA polymerase (1947 aa)
     
 
  0.903
Solyc02g081910.1.1
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1175 aa)
   
   
  0.631
Solyc01g107010.2.1
Uncharacterized protein (688 aa)
     
      0.610
Solyc01g034150.2.1
Uncharacterized protein (713 aa)
     
      0.609
Solyc11g067140.1.1
Uncharacterized protein (932 aa)
     
 
  0.609
Solyc11g067130.1.1
Uncharacterized protein (660 aa)
     
 
  0.609
Solyc11g067120.1.1
Uncharacterized protein (194 aa)
     
 
  0.609
Solyc11g067110.1.1
Uncharacterized protein (433 aa)
     
 
  0.609
Solyc10g081250.1.1
DNA polymerase (1086 aa)
     
 
  0.602
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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