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STRINGSTRING
101258351 protein (Solanum lycopersicum) - STRING interaction network
"101258351" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258351Uncharacterized protein; Transporter associated with antigen processing protein 2 (638 aa)    
Predicted Functional Partners:
101251605
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (230 aa)
           
  0.774
101260105
Protein of unknown function, DUF647 (516 aa)
     
   
  0.763
101266536
Proteasome activating protein 200 (1813 aa)
     
   
  0.752
101262630
annotation not available (817 aa)
       
 
  0.741
101267123
annotation not available (1691 aa)
           
  0.728
101249740
Uncharacterized protein; RNA helicase 1 (513 aa)
           
  0.657
Solyc12g049330.1.1
E3 Ubiquitin ligase family protein (365 aa)
           
  0.643
Solyc10g024320.1.1
annotation not available (591 aa)
   
   
  0.595
Solyc10g024310.1.1
annotation not available (117 aa)
   
   
  0.595
Solyc10g024300.1.1
annotation not available (232 aa)
   
   
  0.595
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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