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STRINGSTRING
101256665 protein (Solanum lycopersicum) - STRING interaction network
"101256665" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256665annotation not available (622 aa)    
Predicted Functional Partners:
101258649
Uncharacterized protein; Sequence-specific DNA binding transcription factors (372 aa)
     
 
  0.873
Solyc05g044610.1.1
Transducin family protein / WD-40 repeat family protein (1864 aa)
     
        0.863
101255211
Tyrosine--tRNA ligase; Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (521 aa)
     
        0.852
101255295
Ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family (271 aa)
     
        0.802
101266474
Ribosomal protein L18e/L15 superfamily protein (282 aa)
     
        0.802
101255281
annotation not available (415 aa)
     
 
  0.770
Solyc08g006470.2.1
annotation not available (334 aa)
     
 
  0.770
Solyc01g101250.2.1
D111/G-patch domain-containing protein (293 aa)
     
   
  0.764
101255621
Hydroxyproline-rich glycoprotein family protein (345 aa)
           
  0.764
Solyc03g120080.2.1
Periodic tryptophan protein 2 (666 aa)
     
        0.741
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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