STRINGSTRING
Solyc03g115140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g115140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g115140.2.1Uncharacterized protein (622 aa)    
Predicted Functional Partners:
Solyc04g064570.2.1
Uncharacterized protein (372 aa)
     
 
  0.679
Solyc12g096450.1.1
Uncharacterized protein (415 aa)
     
 
  0.653
Solyc08g006470.2.1
Uncharacterized protein (334 aa)
     
 
  0.653
Solyc11g008430.1.1
Uncharacterized protein (200 aa)
       
      0.556
Solyc02g081380.2.1
Uncharacterized protein (200 aa)
       
      0.556
Solyc02g069370.2.1
Uncharacterized protein (200 aa)
       
      0.556
Solyc02g036450.2.1
Uncharacterized protein (200 aa)
       
      0.556
Solyc11g011780.1.1
Uncharacterized protein (502 aa)
     
      0.502
Solyc06g053800.1.1
Uncharacterized protein (505 aa)
     
      0.502
Solyc11g045610.1.1
Uncharacterized protein (640 aa)
       
      0.463
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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