STRINGSTRING
Solyc03g115470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g115470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g115470.2.1Uncharacterized protein (343 aa)    
Predicted Functional Partners:
Solyc10g081850.1.1
Uncharacterized protein (303 aa)
     
  0.975
Solyc06g053760.2.1
Uncharacterized protein (311 aa)
     
  0.965
Solyc10g008570.2.1
Uncharacterized protein (872 aa)
     
  0.963
Solyc08g079520.2.1
Uncharacterized protein (666 aa)
     
  0.962
Solyc12g005580.1.1
Uncharacterized protein (310 aa)
     
  0.962
Solyc10g081580.1.1
Uncharacterized protein (310 aa)
     
  0.962
Solyc07g052470.2.1
Uncharacterized protein (305 aa)
     
  0.962
Solyc02g085090.1.1
Uncharacterized protein (299 aa)
     
  0.962
Solyc01g109750.2.1
Uncharacterized protein (280 aa)
     
  0.962
Solyc01g056810.2.1
Uncharacterized protein (253 aa)
     
  0.962
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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