STRINGSTRING
Solyc03g115840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g115840.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g115840.2.1Uncharacterized protein (720 aa)    
Predicted Functional Partners:
Solyc09g009180.2.1
Uncharacterized protein (686 aa)
           
  0.503
Solyc03g007610.2.1
Uncharacterized protein (715 aa)
           
  0.503
Solyc12g044900.1.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (786 aa)
           
  0.487
Solyc03g121590.2.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (815 aa)
           
  0.487
Solyc02g030450.2.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (799 aa)
           
  0.487
LOC543732
Ubiquitin activating enzyme (318 aa)
           
  0.446
Solyc03g019730.2.1
Uncharacterized protein (346 aa)
           
  0.446
Solyc01g079610.2.1
Uncharacterized protein (345 aa)
     
   
  0.427
Solyc02g080130.2.1
Uncharacterized protein (300 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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