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STRINGSTRING
101250203 protein (Solanum lycopersicum) - STRING interaction network
"101250203" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250203annotation not available (206 aa)    
Predicted Functional Partners:
101261490
annotation not available (314 aa)
     
        0.870
101250451
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
     
        0.870
101262501
Ribosomal protein L3 plastid; Belongs to the universal ribosomal protein uL3 family (304 aa)
     
        0.866
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
        0.861
Solyc04g014390.2.1
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein (175 aa)
     
        0.861
Solyc02g081810.2.1
Uncharacterized protein; Homologue of NAP57 (597 aa)
     
        0.855
101259142
annotation not available (312 aa)
     
        0.854
Solyc11g006070.1.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (153 aa)
     
   
  0.852
101263184
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
        0.852
Solyc10g080180.1.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (499 aa)
     
        0.850
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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