STRINGSTRING
Solyc03g116050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g116050.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g116050.1.1Uncharacterized protein (517 aa)    
Predicted Functional Partners:
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
    0.982
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
    0.982
Solyc10g081070.1.1
Uncharacterized protein (684 aa)
     
    0.982
Solyc07g041790.1.1
Uncharacterized protein (73 aa)
     
    0.982
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.976
Solyc12g040310.1.1
Uncharacterized protein (66 aa)
     
  0.973
Solyc03g044040.1.1
Uncharacterized protein (190 aa)
     
  0.973
Solyc03g044030.1.1
Uncharacterized protein (361 aa)
     
  0.973
Solyc01g086990.2.1
Uncharacterized protein (916 aa)
     
  0.973
cdc5
CDC5-like protein (987 aa)
     
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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