STRINGSTRING
Solyc03g116140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g116140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g116140.2.1Uncharacterized protein (408 aa)    
Predicted Functional Partners:
Solyc08g065160.2.1
Uncharacterized protein (201 aa)
       
      0.625
Solyc06g069480.2.1
Uncharacterized protein (2088 aa)
       
      0.622
Solyc02g086580.2.1
Uncharacterized protein (1204 aa)
       
      0.622
Solyc05g016460.1.1
Uncharacterized protein (651 aa)
       
      0.602
Solyc05g016440.2.1
Uncharacterized protein (1011 aa)
       
      0.602
Solyc10g055450.1.1
Uncharacterized protein (1846 aa)
     
   
  0.530
Solyc09g007310.2.1
Uncharacterized protein (1553 aa)
     
   
  0.530
Solyc01g111530.2.1
Uncharacterized protein (1860 aa)
     
   
  0.530
Solyc03g120480.2.1
Uncharacterized protein (504 aa)
       
      0.506
Solyc02g088200.2.1
Uncharacterized protein (194 aa)
       
      0.506
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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