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STRINGSTRING
101260218 protein (Solanum lycopersicum) - STRING interaction network
"101260218" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260218annotation not available (459 aa)    
Predicted Functional Partners:
101257700
Uncharacterized protein; Ribosome recycling factor, chloroplast precursor (267 aa)
     
   
  0.915
Solyc06g019200.2.1
Uncharacterized protein; Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (468 aa)
     
        0.746
101264420
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (360 aa)
     
      0.734
101249610
Uncharacterized protein; Cytochrome b561/ferric reductase transmembrane protein family (231 aa)
           
  0.719
101256769
Uncharacterized protein; Cysteinyl-tRNA synthetase, class Ia family protein (569 aa)
   
   
  0.653
ureD
Putative urease accessory protein D (297 aa)
     
   
  0.649
ureF
Putative urease accessory protein F (242 aa)
           
  0.626
101246777
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (344 aa)
     
      0.625
101251377
annotation not available (564 aa)
   
   
  0.609
101251351
Hydroxyproline-rich glycoprotein family protein (443 aa)
     
   
  0.598
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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