STRINGSTRING
Solyc03g117510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g117510.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g117510.2.1Uncharacterized protein (446 aa)    
Predicted Functional Partners:
Solyc07g064950.2.1
Uncharacterized protein (527 aa)
       
 
  0.566
Solyc08g068120.1.1
Uncharacterized protein (1451 aa)
   
 
  0.554
Solyc00g030210.1.1
Annotation not available (1147 aa)
     
 
  0.531
Solyc11g017230.1.1
Uncharacterized protein (378 aa)
   
   
  0.521
Solyc03g119070.2.1
Uncharacterized protein (544 aa)
   
   
  0.521
Solyc03g062910.2.1
Uncharacterized protein (168 aa)
   
   
  0.521
Solyc03g025900.2.1
Uncharacterized protein (600 aa)
   
   
  0.521
Solyc02g071530.1.1
Uncharacterized protein (742 aa)
   
   
  0.521
Solyc02g067670.2.1
Uncharacterized protein (1539 aa)
   
   
  0.521
Solyc01g102370.2.1
Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (382 aa)
   
   
  0.521
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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