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STRINGSTRING
Solyc03g118010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g118010.2.1" - annotation not available in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g118010.2.1annotation not available (956 aa)    
Predicted Functional Partners:
101255013
Protein arginine N-methyltransferase; SHK1 binding protein 1; Belongs to the class I-like SAM-binding methyltransferase superfamily (655 aa)
     
   
  0.735
Solyc05g048810.2.1
Uncharacterized protein; Adenosine deaminases;RNA binding;RNA binding;adenosine deaminases (431 aa)
     
 
  0.716
101250123
Uncharacterized protein; GroES-like zinc-binding alcohol dehydrogenase family protein (384 aa)
       
 
  0.702
101259099
annotation not available (268 aa)
           
  0.698
Solyc07g055660.2.1
Glycine-rich protein (163 aa)
           
  0.687
101263645
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (1012 aa)
           
  0.623
101245740
Uncharacterized protein; Yeast YAK1-related gene 1 (949 aa)
     
   
  0.580
Solyc03g118640.2.1
Uncharacterized protein; Ketose-bisphosphate aldolase class-II family protein (1343 aa)
   
   
  0.579
Solyc05g056130.2.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (486 aa)
     
      0.574
101264927
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (612 aa)
     
      0.574
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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