STRINGSTRING
Solyc03g118420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g118420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g118420.2.1Uncharacterized protein (1037 aa)    
Predicted Functional Partners:
CIP3
Peptidyl-prolyl cis-trans isomerase (112 aa)
       
      0.883
Solyc11g028100.1.1
Uncharacterized protein (414 aa)
       
 
  0.718
Solyc06g011280.2.1
Uncharacterized protein (413 aa)
       
 
  0.718
Solyc09g050030.1.1
Uncharacterized protein (62 aa)
       
      0.432
Solyc04g079380.1.1
Uncharacterized protein (108 aa)
       
      0.432
Solyc12g098660.1.1
Uncharacterized protein (373 aa)
           
  0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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