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STRINGSTRING
101243872 protein (Solanum lycopersicum) - STRING interaction network
"101243872" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243872annotation not available (676 aa)    
Predicted Functional Partners:
101256100
Uncharacterized protein; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mannose-6-phosphate receptor, binding (InterPro-IPR009011), Glucosidase II b /.../bunit-like (InterPro-IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (316 aa)
     
 
  0.979
CURL3
Brassinosteroid LRR receptor kinase; Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants (By similarity) (1207 aa)
       
 
  0.937
101256736
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
 
  0.900
101259624
Unknown protein; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1630 (InterPro-IPR012860); Has 290 Blast hits to 263 proteins in 104 species- Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes /.../(source- NCBI BLink) (659 aa)
     
   
  0.868
101266615
UBC32; Ubiquitin-conjugating enzyme 32; Belongs to the ubiquitin-conjugating enzyme family (301 aa)
     
 
  0.820
Solyc06g072790.2.1
annotation not available (504 aa)
     
 
  0.812
Solyc03g096930.2.1
annotation not available (498 aa)
     
 
  0.812
101258505
RING/U-box superfamily protein (477 aa)
     
 
  0.732
101246930
annotation not available (434 aa)
     
 
  0.732
101251454
annotation not available (438 aa)
     
 
  0.732
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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