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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g118820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g118820.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g118820.2.1annotation not available (242 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
 
  0.844
101248349
annotation not available (1134 aa)
       
 
  0.822
101259410
annotation not available (444 aa)
     
 
  0.670
101261051
annotation not available (444 aa)
     
 
  0.670
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor; Rab-GDP dissociation inhibitor ; Belongs to the Rab GDI family (445 aa)
     
 
  0.670
Solyc12g056520.1.1
annotation not available (977 aa)
       
 
  0.533
101266933
annotation not available (1106 aa)
       
 
  0.533
101267054
annotation not available (3587 aa)
     
 
  0.528
101266526
Uncharacterized protein; TRS120 (1185 aa)
       
 
  0.520
101267960
Kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1265 aa)
       
 
  0.493
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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