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STRINGSTRING
101243695 protein (Solanum lycopersicum) - STRING interaction network
"101243695" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243695annotation not available (465 aa)    
Predicted Functional Partners:
101244231
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (985 aa)
         
  0.853
ER68
Uncharacterized protein; Ethylene-responsive RNA helicase ; Belongs to the DEAD box helicase family (479 aa)
           
  0.751
101247481
Proteasome component (PCI) domain protein (428 aa)
           
  0.745
101264580
Calmodulin-binding protein-related (460 aa)
           
  0.702
Solyc01g006830.2.1
annotation not available (444 aa)
           
  0.675
101257225
annotation not available (76 aa)
           
  0.673
101263649
Elongation factor P (EF-P) family protein (229 aa)
           
  0.657
Solyc05g008380.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G12400.1); Has 173 Blast hits to 169 proteins i /.../pecies- Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (560 aa)
           
  0.648
101265421
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the DEAD box helicase family (651 aa)
           
  0.583
101248888
Cellulose synthase family protein; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1041 aa)
           
  0.550
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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