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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g118990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g118990.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g118990.1.1annotation not available (70 aa)    
Predicted Functional Partners:
101249702
annotation not available (414 aa)
     
 
  0.989
101248107
annotation not available (413 aa)
     
 
  0.989
Solyc12g010520.1.1
annotation not available (405 aa)
     
 
  0.985
101261770
annotation not available (437 aa)
     
 
  0.985
Solyc07g006130.1.1
annotation not available (405 aa)
     
 
  0.985
101246720
annotation not available (437 aa)
     
 
  0.985
101245737
annotation not available (329 aa)
     
 
  0.956
ArcA1
LeArcA1 protein (326 aa)
     
 
  0.956
ArcA2
LeArcA2 protein (326 aa)
     
 
  0.956
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.937
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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