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LOC543698 protein (Solanum lycopersicum) - STRING interaction network
"LOC543698" - Beta-mannosidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543698Beta-mannosidase; Beta-mannosidase enzyme (514 aa)    
Predicted Functional Partners:
Solyc04g009630.2.1
Uncharacterized protein (649 aa)
       
  0.913
Solyc02g069670.2.1
Uncharacterized protein (841 aa)
       
  0.913
Solyc10g085650.1.1
Uncharacterized protein (575 aa)
         
  0.906
Solyc10g085640.1.1
Uncharacterized protein (557 aa)
         
  0.906
Solyc10g085360.1.1
Uncharacterized protein (575 aa)
         
  0.906
LIN8
Cell-wall invertase (589 aa)
         
  0.906
Wiv-1
Cell-wall invertase (582 aa)
         
  0.906
LIN7
Cell-wall invertase (583 aa)
         
  0.906
lin5
Beta-fructofuranosidase; Cell-wall invertase (584 aa)
         
  0.906
lin9
Invertase (652 aa)
         
  0.906
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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