STRINGSTRING
Solyc03g119700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g119700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g119700.2.1Uncharacterized protein (159 aa)    
Predicted Functional Partners:
Solyc03g007110.2.1
Uncharacterized protein (235 aa)
   
 
  0.959
CD4B
ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic ; May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast (923 aa)
   
 
  0.951
CD4A
ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic ; May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast (926 aa)
   
 
  0.951
Solyc11g006650.1.1
Uncharacterized protein (844 aa)
   
 
  0.943
Solyc10g082000.1.1
Uncharacterized protein (724 aa)
   
 
  0.943
Solyc09g055230.2.1
Uncharacterized protein (1075 aa)
   
 
  0.943
Solyc07g018070.2.1
Uncharacterized protein (1022 aa)
   
 
  0.943
Solyc07g006540.2.1
Uncharacterized protein (1052 aa)
   
 
  0.943
Solyc06g082560.1.1
Uncharacterized protein (854 aa)
   
 
  0.943
Solyc06g051460.2.1
Uncharacterized protein (1009 aa)
   
 
  0.943
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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