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STRINGSTRING
TCP9 protein (Solanum lycopersicum) - STRING interaction network
"TCP9" - BRANCHED1A isoform 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP9BRANCHED1A isoform 1 (346 aa)    
Predicted Functional Partners:
101267060
Uncharacterized protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
           
  0.859
Solyc12g099340.1.1
Uncharacterized protein; Calmodulin-binding transcription factor SR3L (915 aa)
           
  0.730
Solyc11g013240.1.1
Putative protein kinase 1 (741 aa)
           
  0.696
101254924
Uncharacterized protein; Cytochrome P450, family 711, subfamily A, polypeptide 1 (519 aa)
           
  0.694
101254620
Uncharacterized protein; Carotenoid cleavage dioxygenase 8 (557 aa)
           
  0.685
CCD7
Carotenoid cleavage dioxygenase 7 (663 aa)
           
  0.682
101258825
annotation not available (722 aa)
           
  0.634
Solyc07g055120.2.1
annotation not available (676 aa)
           
  0.634
Ls
Lateral suppressor; Lateral suppressor protein ; Belongs to the GRAS family (428 aa)
       
 
  0.583
Solyc09g065750.2.1
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species- Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (so /.../NCBI BLink) (292 aa)
           
  0.576
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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