STRINGSTRING
Solyc03g120090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g120090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120090.1.1Uncharacterized protein (305 aa)    
Predicted Functional Partners:
Solyc11g069290.1.1
Uncharacterized protein (251 aa)
 
  0.997
Solyc02g091340.2.1
Uncharacterized protein (309 aa)
     
  0.955
Solyc03g113780.2.1
Uncharacterized protein (529 aa)
       
  0.947
Solyc03g113770.2.1
Uncharacterized protein (471 aa)
       
  0.947
Solyc06g081980.1.1
Uncharacterized protein (309 aa)
   
 
0.900
psi14B
Putative phosphatase (269 aa)
         
    0.900
psi14A
Putative phosphatase (269 aa)
         
    0.900
psi14C
Putative acid phosphatase; Putative phosphatase (269 aa)
         
    0.900
Solyc03g121420.2.1
Uncharacterized protein (274 aa)
         
    0.900
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.556
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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