STRINGSTRING
Solyc03g120130.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g120130.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120130.2.1Uncharacterized protein (334 aa)    
Predicted Functional Partners:
Solyc12g098530.1.1
Uncharacterized protein (309 aa)
           
  0.433
Solyc03g033470.2.1
Uncharacterized protein (315 aa)
           
  0.431
Solyc11g068990.1.1
Uncharacterized protein (302 aa)
           
  0.429
Solyc02g087640.2.1
Uncharacterized protein (482 aa)
           
  0.429
Solyc11g020590.1.1
Uncharacterized protein (256 aa)
           
  0.414
Solyc09g074650.2.1
Uncharacterized protein (420 aa)
           
  0.414
Solyc03g078020.2.1
Uncharacterized protein (283 aa)
           
  0.414
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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