STRINGSTRING
Solyc03g120470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g120470.2.1" - MIP in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120470.2.1MIP (1264 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
 
  0.929
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
 
  0.908
Solyc05g055350.2.1
Uncharacterized protein (361 aa)
         
  0.905
Solyc03g117490.2.1
Uncharacterized protein (522 aa)
   
 
  0.891
Solyc03g113140.2.1
Uncharacterized protein (301 aa)
         
  0.890
Solyc03g097160.2.1
Uncharacterized protein (871 aa)
     
        0.831
Solyc12g044370.1.1
Uncharacterized protein (830 aa)
         
 
0.800
Solyc10g079670.1.1
Uncharacterized protein (754 aa)
         
 
0.800
POLR1B
Probable DNA-directed RNA polymerase I subunit RPA2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1096 aa)
     
   
  0.783
Solyc07g042380.2.1
Uncharacterized protein (1248 aa)
     
        0.730
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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