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101267975 protein (Solanum lycopersicum) - STRING interaction network
"101267975" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267975Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 12 growth stages; BEST Arabidopsis thaliana protein match is- Vacuolar sorting protein 9 /.../) domain (TAIR-AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (228 aa)    
Predicted Functional Partners:
101260010
Uncharacterized protein; RNA-binding CRS1 / YhbY (CRM) domain-containing protein (563 aa)
     
   
  0.769
101262511
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (478 aa)
           
  0.743
101246211
Uncharacterized protein; Endonucleases (816 aa)
     
   
  0.696
Solyc01g095680.2.1
annotation not available (206 aa)
     
   
  0.692
Solyc11g006680.1.1
annotation not available (932 aa)
           
  0.685
Solyc04g009730.2.1
annotation not available (524 aa)
           
  0.685
Solyc04g009720.1.1
annotation not available (340 aa)
           
  0.685
Solyc10g080040.1.1
Uncharacterized protein; LOCATED IN- mitochondrion; BEST Arabidopsis thaliana protein match is- Ribonuclease III family protein (TAIR-AT4G37510.1) (593 aa)
     
   
  0.683
Solyc10g077120.1.1
Uncharacterized protein; Photosystem II BY (187 aa)
     
   
  0.659
101263225
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (842 aa)
           
  0.654
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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