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STRINGSTRING
Solyc03g120660.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g120660.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120660.2.1annotation not available (158 aa)    
Predicted Functional Partners:
HPR
Uncharacterized protein; Hydroxypyruvate reductase ; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family (386 aa)
   
     
  0.776
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
       
      0.746
101245499
Nuclear matrix protein-related (608 aa)
           
  0.740
101263280
Sulfhydryl oxidase; Erv1/Alr family protein (200 aa)
       
      0.639
101055519
Hop-interacting protein THI032 (401 aa)
   
   
  0.632
101259192
HXXXD-type acyl-transferase family protein (465 aa)
           
  0.631
SppS
Solanesyl diphosphate synthase ; Belongs to the FPP/GGPP synthase family (398 aa)
           
  0.626
101258991
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species /.../ae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (513 aa)
           
  0.570
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (292 aa)
           
  0.548
101244755
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (452 aa)
   
   
  0.534
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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