STRINGSTRING
Solyc03g121030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g121030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g121030.1.1Uncharacterized protein (1140 aa)    
Predicted Functional Partners:
Solyc09g074400.2.1
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog ; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins (351 aa)
       
  0.968
Solyc09g009410.2.1
Uncharacterized protein (348 aa)
       
  0.968
Solyc08g076120.2.1
Uncharacterized protein (70 aa)
       
  0.959
Solyc06g083060.2.1
Uncharacterized protein (136 aa)
       
  0.959
Solyc03g034050.2.1
Uncharacterized protein (70 aa)
       
  0.959
Solyc06g008970.2.1
Uncharacterized protein (758 aa)
     
  0.958
Solyc10g081250.1.1
DNA polymerase (1086 aa)
       
  0.825
Solyc02g093300.2.1
DNA polymerase alpha catalytic subunit (1561 aa)
       
  0.824
RTEL1
Regulator of telomere elongation helicase 1 (1040 aa)
     
  0.802
Solyc10g079510.1.1
Uncharacterized protein (1243 aa)
     
  0.796
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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