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Solyc03g121120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g121120.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g121120.2.1Uncharacterized protein; ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases (588 aa)    
Predicted Functional Partners:
101255653
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (769 aa)
   
        0.823
RAD51
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA (By similarity) (342 aa)
     
   
  0.770
Solyc00g167290.1.1
annotation not available (230 aa)
   
 
  0.713
101266592
Uncharacterized protein; Allantoate amidohydrolase (493 aa)
     
   
  0.692
Solyc00g041220.1.1
annotation not available (261 aa)
   
   
  0.682
101262147
Uncharacterized protein; HhH-GPD base excision DNA repair family protein (476 aa)
         
  0.670
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
         
  0.655
101265389
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (297 aa)
         
  0.643
101246334
AAA-type ATPase family protein (583 aa)
     
 
  0.633
101258844
Uncharacterized protein; MUTM homolog-1 (446 aa)
     
   
  0.630
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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