STRINGSTRING
Solyc03g121260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g121260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g121260.2.1Uncharacterized protein (569 aa)    
Predicted Functional Partners:
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
        0.830
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
        0.830
Solyc01g065580.2.1
Uncharacterized protein (620 aa)
     
        0.807
Solyc12g015710.1.1
Uncharacterized protein (564 aa)
   
 
  0.748
Solyc07g042380.2.1
Uncharacterized protein (1248 aa)
     
        0.748
Solyc04g015940.2.1
Uncharacterized protein (1162 aa)
     
        0.748
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
        0.730
Solyc01g087670.2.1
Uncharacterized protein (907 aa)
     
        0.730
Solyc04g082330.2.1
Uncharacterized protein (791 aa)
     
        0.729
Solyc01g103740.2.1
Uncharacterized protein (504 aa)
     
        0.729
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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