STRINGSTRING
Solyc03g122260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g122260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g122260.2.1Uncharacterized protein (128 aa)    
Predicted Functional Partners:
Solyc09g009640.2.1
Uncharacterized protein (99 aa)
     
  0.985
Solyc09g091500.2.1
Uncharacterized protein (88 aa)
     
  0.985
Solyc10g078450.1.1
Uncharacterized protein (44 aa)
     
  0.985
Solyc11g005370.1.1
Uncharacterized protein (97 aa)
     
  0.985
Solyc09g072970.2.1
Uncharacterized protein (93 aa)
     
  0.976
Solyc06g084350.2.1
Uncharacterized protein (93 aa)
     
  0.976
Solyc01g099740.2.1
Uncharacterized protein (151 aa)
     
  0.976
Solyc09g065940.2.1
Uncharacterized protein (136 aa)
     
  0.975
Solyc09g075130.2.1
Uncharacterized protein (109 aa)
     
  0.962
Solyc03g033600.2.1
Uncharacterized protein (132 aa)
     
  0.959
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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