STRINGSTRING
Solyc03g123370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g123370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g123370.2.1Uncharacterized protein (721 aa)    
Predicted Functional Partners:
Solyc00g026870.1.1
Annotation not available (465 aa)
     
 
  0.832
Solyc04g080900.2.1
Uncharacterized protein (681 aa)
     
 
  0.790
Solyc04g058140.2.1
Uncharacterized protein (538 aa)
     
 
  0.790
Solyc01g067530.2.1
Uncharacterized protein (671 aa)
     
 
  0.790
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
         
  0.674
Solyc02g077280.2.1
Uncharacterized protein (438 aa)
 
   
  0.582
Solyc00g030210.1.1
Annotation not available (1147 aa)
         
  0.573
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
 
  0.547
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
 
  0.533
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
         
  0.509
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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