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Solyc04g005140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g005140.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
Solyc04g005140.2.1annotation not available (354 aa)    
Predicted Functional Partners:
101244927
Uncharacterized protein; Uridine 5’-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) (477 aa)
   
  0.956
101255711
annotation not available (326 aa)
   
 
  0.952
Solyc03g078080.2.1
Amino acid kinase family protein (326 aa)
   
 
  0.922
101256028
annotation not available (286 aa)
         
    0.900
101259471
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (216 aa)
     
 
  0.766
101249532
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the adenylate kinase family (237 aa)
     
 
  0.766
101243930
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (209 aa)
     
 
  0.766
101267611
annotation not available (127 aa)
     
 
  0.747
101268314
annotation not available (124 aa)
     
 
  0.747
Solyc10g083430.1.1
annotation not available (225 aa)
     
  0.713
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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